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  1. Designing Allele-Specific Competitive-Extension PCR-Based Assays …

    An important prospective use of our AS-PCR design tool is rapid testing for specific variations in pathogen genomes. For example, the four-way genotyping assay may provide information on …

  2. Polymerase Chain Reaction: Basic Protocol Plus Troubleshooting …

    Standard PCR reagents include a set of appropriate primers for the desired target gene or DNA segment to be amplified, DNA polymerase, a buffer for the specific DNA polymerase, …

  3. An Internal Control for Routine Diagnostic PCR: Design, Properties, …

    The results of this study demonstrate that incorporating an IC into PCR-based tests increases sensitivity by enabling the user to identify and retest samples inhibitory to PCR.

  4. Polymerase Chain Reaction (PCR) - StatPearls - NCBI Bookshelf

    Jul 7, 2025 · Kary Mullis introduced PCR in 1985 and was later granted the Nobel Prize in Chemistry for this contribution. PCR enables precise detection and analysis of amplified DNA …

  5. Parameters for Successful PCR Primer Design - PubMed

    Abstract Primers are critical components of any PCR assay, as they are the main determinants of its specificity, sensitivity, and robustness.

  6. Methods for characterization of alternative RNA splicing - PMC

    Through careful primer and PCR design, differences in splice isoform expression in cDNA generated from total RNA can be visualized using agarose gel electrophoresis.

  7. qPCR primer design revisited - PMC

    We provide a concise overview of the main primer-related issues that confront anyone wanting to design a qPCR assay, consider the main criteria that have an impact on assay performance, …

  8. Real-time PCR (qPCR) primer design using free online software

    It addresses the basic fluorescent chemistries of real-time PCR, the basic rules and pitfalls of primer design, and provides a step-by-step protocol for designing SYBR® Green-based …

  9. Multiplex PCR Design for Scalable Resequencing - PubMed

    Abstract While conventional PCR applications typically focus on a single PCR assay per reaction, multiplex PCR applications are a convenient and scalable solution becoming more routine.

  10. NGS-PrimerPlex: High-throughput primer design for multiplex …

    Multiplex polymerase chain reaction (PCR) has multiple applications in molecular biology, including developing new targeted next-generation sequencing (NGS) panels. We present …